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Integration of transcriptional and mutational data simplifies the stratification of peripheral T-cell lymphoma

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Maura F. et al, (2019), American Journal of Hematology, 94, 628 - 634

The circular RNome of primary breast cancer

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Smid M. et al, (2019), Genome Research, 29, 356 - 366

Unsupervised correction of gene-independent cell responses to CRISPR-Cas9 targeting

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Iorio F. et al, (2018), BMC Genomics, 19

The driver landscape of sporadic chordoma

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Tarpey PS. et al, (2017), Nature Communications, 8

Genomic classification and prognosis in acute myeloid leukemia

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Papaemmanuil E. et al, (2016), New England Journal of Medicine, 374, 2209 - 2221

Landscape of somatic mutations in 560 breast cancer whole-genome sequences

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Nik-Zainal S. et al, (2016), Nature, 534, 47 - 54

The topography of mutational processes in breast cancer genomes

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Morganella S. et al, (2016), Nature Communications, 7

cgpCaVEManWrapper: Simple execution of caveman in order to detect somatic single nucleotide variants in NGS data

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Jones D. et al, (2016), Current Protocols in Bioinformatics, 2016, 15.10.1 - 15.10.18

A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing

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Alioto TS. et al, (2015), Nature Communications, 6

Erratum: The Life History of 21 Breast Cancers (Cell 149 (994-1007))

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Nik-Zainal S. et al, (2015), Cell, 162

Subclonal diversification of primary breast cancer revealed by multiregion sequencing

Journal article

Yates LR. et al, (2015), Nature Medicine, 21, 751 - 759

cgpPindel: Identifying Somatically Acquired Insertion and Deletion Events from Paired End Sequencing

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Raine KM. et al, (2015), Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.], 52, 15.7.1 - 15.7.12

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